Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952791.1_cds_XP_016492290.1_82515
CDS Infomation

[gene=LOC107811805] [db_xref=GeneID:107811805] [protein=pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like] [protein_id=XP_016492290.1] [location=complement(join(44713..45756,45862..46779))] [gbkey=CDS]
Sequence

ATGAAGAACACTAATTTGGCTCCACTCTCTACAGTCTCCTACTTGTGTCGACGCCAATAT
TCCACAAATCCTAACGTGGCCAAGTTCTTCAACAGATACTTAGACAAATCCGATGTGTTC
TCGTGGAACTCTATCATTGCCGACTTGGCTCGGAGCGGTGACTCCGTCGAAGCCCTTCGA
GCTTTCTCTTCCATGCGAAAGCTCTCTCTCAAACCAAACCGTTCCACCTTCCCATGTGCC
ATCAAATCCTGTTCCTCCCTTTCCAATCTCTCTTCCGGCAAGCAGACCCACCAACAAGCT
CTCATCTTTGGTTATGAAACCGACCTTTTTGTATCATCCGCCCTCATTGATATGTACTCC
AAGTGTGGTCAACTTGCTGATGCACGAAAGCTGTTTGATCAAATTCCTCAAAAGAATGTT
GTTTCTTGGACCTCCATGATAACTGGCTACGTACAAAATGACCAGCCCCATGAGGCGCTC
TCGCTTTTTAAAGAGCTCTTGGCGGGCCAAGCAGAGGAACTAGTTTCTCTCGACTCGGTT
TCCATGGTTTCCGTGCTATCCGCTTGTTCTCGTGTTTCAGGGAAGACCCTTACCCAAGGG
CTCCATGGCTTTGTCACGAAAAGGGGATTCGATGAGGACCCGGGAGTTGGGAATACGTTA
ATTGATGCCTATGCTAAGTGCGGTGAGGTTGATTTGTCCAGGAAGATGTTTGATGTAATG
CCTGATAAGGACATCATTTCATGGAATTCTATGATCGCAGTTTATGCCCAGCACGGACTT
TCATCTCAGGCACTGGAAATTTTTCGTTCCCTGGCGTGGGATAGAGAGGTTGACTACAAT
GCTGTCACCTTATCAGCCGTGCTGTTGGCTTGTGCACATTCAGGAGCTCTTCAGGCTGGC
AAGTGCATACATGATCAGGTTATAAAAATGAACCTAGAGGATAATGTATATGTGGCTACG
TCCATGATTGACATGTACTGCAAATGTGGAAGATTAAGGACGGCGAGGAACGCATTCAAT
CGGATGAAGGAAAAGAATGTGAAATCATGGTCTGCCTTGATTGCAGGTTATGGTATGCAC
GGTAGAGCCATGGAAGCCCTTCAAGTATTTTACGAGATGAACTTAGCTGGGGTAAAACCA
AATTATATTACCTTTGTCTCTGTCCTAGCAGCTTGTAGCCATGCTGGGTTGCTGGATGAA
GGGTGGTATTGGTTTAAGGCCATGGAGCCTAGATATTGCATACAACCAGGAGTGGAGCAT
TATGCTTGCATGGTTGATCTTCTTGGACGTGCTGGTTTCCTTGCCAAGGCATATAATTTG
ATAGAAGAAATGAAGGTGACGCCTGACTTTGTTGTTTGGGGTTCTCTTCTAGCTGCATGC
AGGATGCACAAGAATGTCGAGCTTGGGGAGATTGCTGCTAGGAACTTGTTTGAATTAGAC
TCGACAAATTGTGGGTATTATGTTTTGCTCTCGAACATATATGCTGATGCTGGGAGGTGG
GAAGATGTAGATAAGATGAGGATACTTATGAAAAATCGTGGATTAAGTAAACCTCCTGGG
TTCAGCCTGCTTGAACTCAAAGGCAGGGTGCATGTATTTCTTGTTGGTGATAGAGAACAC
CCTCAACATGAGAAGATTTATGCATATTTGGAGGAATTATCTGTAAAGCTGCAGATAGCT
GGCTATGTACCCAACATGACATCTGATCTTCATGATGTTGAGGAGGAAGAGAAAGGACTG
ACATTACGAGTTCATAGTGAGAAGCTCGCTGTTGCTTTTGGGGTTATGAATTCCGTCCCT
GGTAGTACAATTCAGGTGATTAAGAATCTTAGGATATGTGGAGACTGTCATACAACAATT
AAGCTAATTGCCAATATTGTTAATAGGGAAATTGTAGTCAGAGATGCAAAGAGATTTCAC
CATTTTAAGGATGGCTTGTGCTCCTGTGGGGACTATTGGTGA

Peptide Sequence

PEP ID

XP_016492290.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Nicotiana tabacum]
Sequence

MKNTNLAPLSTVSYLCRRQYSTNPNVAKFFNRYLDKSDVFSWNSIIADLARSGDSVEALR
AFSSMRKLSLKPNRSTFPCAIKSCSSLSNLSSGKQTHQQALIFGYETDLFVSSALIDMYS
KCGQLADARKLFDQIPQKNVVSWTSMITGYVQNDQPHEALSLFKELLAGQAEELVSLDSV
SMVSVLSACSRVSGKTLTQGLHGFVTKRGFDEDPGVGNTLIDAYAKCGEVDLSRKMFDVM
PDKDIISWNSMIAVYAQHGLSSQALEIFRSLAWDREVDYNAVTLSAVLLACAHSGALQAG
KCIHDQVIKMNLEDNVYVATSMIDMYCKCGRLRTARNAFNRMKEKNVKSWSALIAGYGMH
GRAMEALQVFYEMNLAGVKPNYITFVSVLAACSHAGLLDEGWYWFKAMEPRYCIQPGVEH
YACMVDLLGRAGFLAKAYNLIEEMKVTPDFVVWGSLLAACRMHKNVELGEIAARNLFELD
STNCGYYVLLSNIYADAGRWEDVDKMRILMKNRGLSKPPGFSLLELKGRVHVFLVGDREH
PQHEKIYAYLEELSVKLQIAGYVPNMTSDLHDVEEEEKGLTLRVHSEKLAVAFGVMNSVP
GSTIQVIKNLRICGDCHTTIKLIANIVNREIVVRDAKRFHHFKDGLCSCGDYW

Transcript Sequence

Gene sequence data has not been registered.